Top workflows by tests

daspacio9

pooledpremiumpcrpipeline2

A snakemake pipeline for multiplex sequencing using the Plasmidsaurus Premium PCR service

---

Updated: 2026-09-25 Release: v4.0.2formatting: passedlinting: passed

6 stars

0 watchers

modelblocks-org

module_demand_electricity

A module to prepare demand profiles for Europe at arbitrary spatial resolution, based on ENTSO-E his…

---

Updated: 2026-09-25 Release: v0.2.0formatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_powerplants

Harmonised global powerplant data at any resolution 🏭⚡

---

Updated: 2026-09-25 Release: v0.1.2formatting: passedlinting: passed

1 stars

2 watchers

MPUSP

snakemake-ms-proteomics

Pipeline for automatic processing and quality control of mass spectrometry data

---

Updated: 2026-09-25 Release: v1.1.1formatting: passedlinting: passed

14 stars

1 watchers

snakemake-workflows

rna-seq-xengsort

A standardized Snakemake workflow to separate host and graft sequencing reads from RNAseq data using…

---

Updated: 2026-09-25 Release: v1.2.0formatting: passedlinting: passed

0 stars

0 watchers

modelblocks-org

module_area_potentials

Geospatial analysis to determine available land area for energy infrastructure

---

Updated: 2026-09-25 Release: v2.0.0formatting: passedlinting: passed

3 stars

0 watchers

TRON-Bioinformatics

oblx

Reproducible generation of references and resources for next generation sequencing pipelines.

---

Updated: 2026-09-24 Release: v2.0.2formatting: passedlinting: passed

6 stars

0 watchers

kircherlab

MPRAsnakeflow

With this snakemake pipeline you can process your MPRA sequencing data (assignment and count). It is…

---

Updated: 2026-09-23 Release: v0.7.2formatting: passedlinting: passed

16 stars

1 watchers

MPUSP

snakemake-bacterial-rnaseq-processing

A Snakemake workflow for the processing of short read rnaseq data in bacteria.

---

Updated: 2026-09-22 Release: v2.1.0formatting: passedlinting: passed

3 stars

1 watchers

modelblocks-org

module_euro_building_heat

This module prepares time series of heat demand and heat supply technologies for buildings in Europ…

---

Updated: 2026-09-22 Release: v0.1.0formatting: passedlinting: passed

0 stars

0 watchers

b-brankovics

smkwf-STRAf-typing

Snakemake workflow for STRAf typing Aspergillus fumigatus genome assemblies

---

Updated: 2026-09-21 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

b-brankovics

smkwf-oligo-screening

Snakemake workflow for screening olignucleotide anealing sites and identifying PCR amplicon regions

---

Updated: 2026-09-21 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

snakemake-workflows

single-cell-counts-preprocessing

A standardised Snakemake workflow for preprocessing of single-cell RNAseq count data following singl…

---

Updated: 2026-09-19 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

FilippoGas

GeneProgramsProfiler

Characterize cell type specific gene program deregulations from scRNAseq datasets.

---

Updated: 2026-09-18 Release: v1.1.0formatting: passedlinting: passed

2 stars

0 watchers

FilippoGas

HapScorer

Haplotype-resolved variant effect prediction

---

Updated: 2026-09-18 Release: Noneformatting: passedlinting: passed

1 stars

1 watchers