Top workflows by update
GilbertHan1011
ziyaipek
No description available.
Updated: 2025-10-17 Release: Noneformatting: passedlinting: passed
snakemake-workflows
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
Updated: 2025-10-16 Release: v3.0.0formatting: passedlinting: passed
tmweiskittel
EMseq Alignmet with Cloud
Updated: 2025-10-15 Release: Noneformatting: failedlinting: failed
niekwit
DamMapper: Snakemake workflow for DamID-Seq analysis
Updated: 2025-10-15 Release: v0.6.0formatting: passedlinting: failed
nezapajek
Preparation of a curated catalogue of sequences of possible new tobamoviruses by scanning a large ac…
Updated: 2025-10-15 Release: Noneformatting: passedlinting: failed
loganylchen
No description available.
Updated: 2025-10-15 Release: Noneformatting: failedlinting: passed
mdondrup
No description available.
Updated: 2025-10-15 Release: Noneformatting: failedlinting: failed
khanlab
A Snakemake workflow for pre-processing single plane illumination microscopy (SPIM, aka lightsheet m…
Updated: 2025-10-15 Release: v0.1.0-alphaformatting: passedlinting: failed
JeremyTournayre
No description available.
Updated: 2025-10-14 Release: Noneformatting: failedlinting: failed
snakemake-workflows
A Snakemake workflow for counting single cell RNAseq (scRNA-seq) data with Cell Ranger (Cell Ranger …
Updated: 2025-10-14 Release: v1.0.1formatting: passedlinting: passed
thomasteisberg
No description available.
Updated: 2025-10-14 Release: Noneformatting: failedlinting: passed
snakemake-workflows
Generic, uncertainty aware, parameter free effect size estimation
Updated: 2025-10-10 Release: v1.0.0formatting: passedlinting: passed
niekwit
Snakemake workflow for small RNA-seq analysis
Updated: 2025-10-10 Release: Noneformatting: passedlinting: passed
snakemake-workflows
long read differential expression analysis and splice variant analysis
Updated: 2025-10-08 Release: v2.4.2formatting: passedlinting: failed