Top workflows by update

gynecoloji

snakemake_RNAseq

Containerized Snakemake workflow for RNA-seq: HISAT2 + featureCounts gene counts, Salmon transcript …

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Updated: 2026-07-26 Release: v1.6.1formatting: failedlinting: failed

1 stars

0 watchers

nismod

open-gira

Open-data Global Infrastructure Risk/Resilience Analysis

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Updated: 2026-07-26 Release: v0.4.2formatting: failedlinting: failed

24 stars

3 watchers

tmweiskittel

tmw_align_emseq

No description available.

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Updated: 2026-07-25 Release: Noneformatting: failedlinting: failed

0 stars

0 watchers

ltalignani

evo-shave

DNAseq pipeline

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Updated: 2026-07-23 Release: Noneformatting: failedlinting: failed

0 stars

1 watchers

gynecoloji

snakemake_ATACseq_spikein

Reproducible Snakemake workflow for spike-in–normalized ATAC-seq — concatenated-genome alignment, MA…

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Updated: 2026-07-23 Release: v1.4.3formatting: failedlinting: failed

2 stars

0 watchers

nezapajek

project-tobamo

Preparation of a curated catalogue of sequences of possible new tobamoviruses by scanning a large ac…

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Updated: 2026-07-22 Release: Noneformatting: passedlinting: failed

0 stars

1 watchers

Siffreya

MKD_eDNA_biodiversity

No description available.

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Updated: 2026-07-22 Release: Noneformatting: passedlinting: passed

0 stars

0 watchers

niekwit

rna-seq-star-rmats

Snakemake workflow for splicing analysis of RNA-seq data using rMATS

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Updated: 2026-07-22 Release: v0.1.0formatting: failedlinting: passed

0 stars

0 watchers

loganylchen

NanoRNAMod

No description available.

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Updated: 2026-07-21 Release: v0.1.7formatting: failedlinting: failed

1 stars

1 watchers

snakemake-workflows

rna-seq-xengsort

A standardized Snakemake workflow to separate host and graft sequencing reads from RNAseq data using…

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Updated: 2026-07-21 Release: v1.1.0formatting: passedlinting: passed

0 stars

0 watchers

r1cheu

imputation

imputation pipeline for low-coverage sequencing in hybrid rice

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Updated: 2026-07-21 Release: Noneformatting: failedlinting: failed

0 stars

0 watchers

martykardos

asacphus_fire_frogs

Genomic analysis of Ascaphus thermal tolerance

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Updated: 2026-07-20 Release: Noneformatting: failedlinting: failed

0 stars

0 watchers

open2c

distiller-sm

a Snakemake version of distiller - the Open2C Hi-C mapping workflow

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Updated: 2026-07-20 Release: Noneformatting: failedlinting: failed

5 stars

6 watchers

niekwit

partridge-workflow

Snakemake workflow for PARTRIDGE

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Updated: 2026-07-20 Release: Noneformatting: failedlinting: failed

0 stars

0 watchers

modelblocks-org

module_demand_electricity

A module to prepare demand profiles for Europe at arbitrary spatial resolution, based on ENTSO-E his…

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Updated: 2026-07-18 Release: v0.1.0formatting: passedlinting: passed

0 stars

0 watchers