Top workflows by update

sims-lab

No description available.


Updated: 2025-07-05 Release: Noneformatting: failedlinting: failed

epigen

A Snakemake workflow and MrBiomics module to split, filter, normalize, integrate and select highly v…


Updated: 2025-07-04 Release: v3.0.2formatting: failedlinting: failed

sims-lab

No description available.


Updated: 2025-07-04 Release: Noneformatting: failedlinting: failed

epigen

A Snakemake workflow and MrBiomics module for performing and visualizing differential (expression) a…


Updated: 2025-07-03 Release: v2.1.3formatting: failedlinting: failed

Phlya

snakemake workflow to analyze Hi-C-like data for multiple versions of the reference genome


Updated: 2025-07-03 Release: Noneformatting: failedlinting: failed

durr1602

Snakemake pipeline to analyze demultiplexed sequencing data of DMS experiment, produce diagnostics p…


Updated: 2025-07-02 Release: v1.1.0formatting: failedlinting: passed

epigen

A Snakemake workflow and MrBiomics module for performing genomic region set and gene set enrichment …


Updated: 2025-07-02 Release: v2.0.3formatting: failedlinting: failed

epigen

A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensio…


Updated: 2025-07-02 Release: v3.0.3formatting: failedlinting: failed

panta-123

No description available.


Updated: 2025-07-02 Release: Noneformatting: failedlinting: failed

r1cheu

genome annotation workflow


Updated: 2025-07-02 Release: Noneformatting: failedlinting: passed

baerlachlan

Snakemake workflow for estimating read counts from RNA-seq data


Updated: 2025-07-02 Release: v1.2.9formatting: failedlinting: failed

tavareshugo

Snakemake workflow for indexing reference genomes


Updated: 2025-07-01 Release: Noneformatting: failedlinting: failed

richardstoeckl

prokanota - Flexible pipeline for prokaryotic annotation


Updated: 2025-07-01 Release: 1.1.0formatting: failedlinting: failed

SamBryce-Smith

Snakemake pipeline to run LAPA (UNDER CONSTRUCTION)


Updated: 2025-07-01 Release: Noneformatting: failedlinting: failed

tdayris

Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low T…


Updated: 2025-07-01 Release: 3.10.0formatting: passedlinting: passed