Top workflows by update
AToL-Bioinformatics
No description available.
Updated: 2026-03-30 Release: Noneformatting: passedlinting: failed
tmweiskittel
No description available.
Updated: 2026-03-29 Release: Noneformatting: failedlinting: failed
snakemake-workflows
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/nor…
Updated: 2026-03-29 Release: v6.6.1formatting: passedlinting: failed
nodrogluap
Illumina Dragen cancer genome and transcriptome analysis automation using Snakemake
Updated: 2026-03-27 Release: Noneformatting: failedlinting: failed
niekwit
Snakemake workflow for small RNA-seq analysis
Updated: 2026-03-27 Release: v0.1formatting: failedlinting: failed
nezapajek
Preparation of a curated catalogue of sequences of possible new tobamoviruses by scanning a large ac…
Updated: 2026-03-27 Release: Noneformatting: passedlinting: failed
snakemake-workflows
A template for standard compliant snakemake-workflows
Updated: 2026-03-27 Release: v1.3.0formatting: passedlinting: passed
SarahSaadain
This project contains a pipeline to analyze raw ancient data, obtained from the sequencing facility….
Updated: 2026-03-26 Release: v1.0.0formatting: failedlinting: failed
SarahSaadain
This repository contains a Snakemake pipeline which can be used to determine the best SCGs for aDNA …
Updated: 2026-03-26 Release: v1.0.0formatting: failedlinting: failed
mpitz123
Preparation and alignment of RNA_seq paired-end data with Hisat2 and Picard and counting with HTseq
Updated: 2026-03-26 Release: Noneformatting: failedlinting: passed
ylab-hi
Snakemake-based computational workflow for neoantigen prediction from diverse sources
Updated: 2026-03-26 Release: v0.3.8formatting: failedlinting: failed
ammaraziz
A pipeline based on the Nextstrain for viral outbreak investigations
Updated: 2026-03-25 Release: Noneformatting: passedlinting: failed
MPUSP
A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-rea…
Updated: 2026-03-24 Release: v1.1.1formatting: passedlinting: passed
MPUSP
A Snakemake workflow for basecalling and demultiplexing of Oxford Nanopore data using Dorado.
Updated: 2026-03-24 Release: v1.6.0formatting: passedlinting: passed
epigen
A Snakemake workflow and MrBiomics module for performing and visualizing differential analyses of NG…
Updated: 2026-03-24 Release: v2.2.1formatting: failedlinting: failed