Snakemake executor plugin: cluster-sync
Warning
No documentation found in repository https://github.com/snakemake/snakemake-executor-plugin-cluster-sync. The plugin should provide a docs/intro.md with some introductory sentences and optionally a docs/further.md file with details beyond the auto-generated usage instractions presented in this catalog.
Installation
Install this plugin by installing it with pip or mamba, e.g.:
pip install snakemake-executor-plugin-cluster-sync
Usage
In order to use the plugin, run Snakemake (>=8.0) with the corresponding value for the executor flag:
snakemake --executor cluster-sync ...
with ... being any additional arguments you want to use.
The executor plugin has the following settings:
CLI argument |
Description |
Default |
Choices |
Required |
Type |
|---|---|---|---|---|---|
|
Submission command for synchronous cluster submission (expecting jobscript as single argument). |
|
✗ |