Snakemake executor plugin: kueue
Error
Not a valid plugin: Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_interface_common/plugin_registry/__init__.py", line 31, in __init__
self.collect_plugins()
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_interface_executor_plugins/registry/__init__.py", line 63, in collect_plugins
super().collect_plugins()
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_interface_common/plugin_registry/__init__.py", line 77, in collect_plugins
module = importlib.import_module(moduleinfo.name)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/importlib/__init__.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load
File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 940, in exec_module
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/__init__.py", line 7, in <module>
from .executor import KueueExecutor as Executor # noqa
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/executor.py", line 22, in <module>
import snakemake_executor_plugin_kueue.custom_resource as cr
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/custom_resource.py", line 8, in <module>
config.load_kube_config()
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/kubernetes/config/kube_config.py", line 815, in load_kube_config
loader = _get_kube_config_loader(
^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/runner/micromamba/envs/e9ef3da440924d7597a8dced6fbcea5d/lib/python3.11/site-packages/kubernetes/config/kube_config.py", line 772, in _get_kube_config_loader
raise ConfigException(
kubernetes.config.config_exception.ConfigException: Invalid kube-config file. No configuration found.
Please contact the plugin authors.
Warning
No repository URL found in Pypi metadata. The plugin should specify a repository URL in its pyproject.toml (key 'repository'). It is unclear whether the plugin is maintained and reviewed by the official Snakemake organization (https://github.com/snakemake).