Snakemake executor plugin: kueue

Error

Not a valid plugin: Traceback (most recent call last):

File “<string>”, line 1, in <module> File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_interface_common/plugin_registry/__init__.py”, line 31, in __init__

self.collect_plugins()

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_interface_executor_plugins/registry/__init__.py”, line 63, in collect_plugins

super().collect_plugins()

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_interface_common/plugin_registry/__init__.py”, line 77, in collect_plugins

module = importlib.import_module(moduleinfo.name)

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/importlib/__init__.py”, line 126, in import_module

return _bootstrap._gcd_import(name[level:], package, level)

File “<frozen importlib._bootstrap>”, line 1204, in _gcd_import File “<frozen importlib._bootstrap>”, line 1176, in _find_and_load File “<frozen importlib._bootstrap>”, line 1147, in _find_and_load_unlocked File “<frozen importlib._bootstrap>”, line 690, in _load_unlocked File “<frozen importlib._bootstrap_external>”, line 940, in exec_module File “<frozen importlib._bootstrap>”, line 241, in _call_with_frames_removed File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/__init__.py”, line 7, in <module>

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/executor.py”, line 22, in <module>

import snakemake_executor_plugin_kueue.custom_resource as cr

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/snakemake_executor_plugin_kueue/custom_resource.py”, line 8, in <module>

config.load_kube_config()

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/kubernetes/config/kube_config.py”, line 815, in load_kube_config

loader = _get_kube_config_loader(

File “/home/runner/micromamba/envs/485becf73f98405d8a0aa5b5221267a0/lib/python3.11/site-packages/kubernetes/config/kube_config.py”, line 772, in _get_kube_config_loader

raise ConfigException(

kubernetes.config.config_exception.ConfigException: Invalid kube-config file. No configuration found.

Please contact the plugin author.

Warning

No repository URL found in Pypi metadata. The plugin should specify a repository URL in its pyproject.toml (key ‘repository’). It is unclear whether the plugin is maintained and reviewed by the official Snakemake organization (https://github.com/snakemake).