Snakemake executor plugin: slurm-jobstep

Warning

No documentation found in repository https://github.com/snakemake/snakemake-executor-plugin-slurm-jobstep. The plugin should provide a docs/intro.md with some introductory sentences and optionally a docs/further.md file with details beyond the auto-generated usage instractions presented in this catalog.

Installation

Install this plugin by installing it with pip or mamba, e.g.:

pip install snakemake-executor-plugin-slurm-jobstep

Usage

In order to use the plugin, run Snakemake (>=8.0) with the corresponding value for the executor flag:

snakemake --executor slurm-jobstep ...

with ... being any additional arguments you want to use.