Snakemake logger plugin: flowo
Warning
No repository URL found in Pypi metadata. The plugin should specify a repository URL in its pyproject.toml (key 'repository'). It is unclear whether the plugin is maintained and reviewed by the official Snakemake organization (https://github.com/snakemake).
Installation
Install this plugin by installing it with pip or mamba directly, e.g.:
pip install snakemake-logger-plugin-flowo
Or, if you are using pixi, add the plugin to your pixi.toml. Be careful to put it under the right dependency type based on the plugin’s availability, e.g.:
snakemake-logger-plugin-flowo = "*"
Usage
In order to use the plugin, run Snakemake (>=9.0) with the corresponding value for the logger flag:
snakemake --logger flowo ...
with ... being any additional arguments you want to use.
Settings
The logger plugin has the following settings (which can be passed via command line, the workflow or environment variables, if provided in the respective columns):
CLI argument |
Description |
Default |
Choices |
Required |
Type |
|---|---|---|---|---|---|
|
Set name of this workflow |
|
✗ |
||
|
Set tags of this workflow, separated by ‘,’ |
|
✗ |